Linjing Lan
LinkedIn: https://www.linkedin.com/in/linjing-lan-865b59294/
Email: L.Lan-1@sms.ed.ac.uk
PhD Project: Comparative epigenomics to understand transcriptional regulation in farmed fishes
Supervised by: Dr Doug Vernimmen (The Roslin Institute) and Prof. Dan Macqueen
Postgraduate research
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My PhD is funded by the The Royal (Dick) School of Veterinary Studies, University of Edinburgh. Our project is focused on studying and comparing genomic features and gene regulation of farmed fish in the context of whole genome duplication events and species evolution. By employing biotinylated CxxC affinity purification (Bio-CAP), we aim to identify and compare CpG islands (CGIs) across species. Additionally, I will leverage existing datasets to capture gene expression and epigenetic regulation patterns. Disentangling the regulatory and genomic complexities of fish evolution will be the main task of my PhD studies, the results will thereby advance knowledge in evolutionary genomics, aquaculture and fish health.
Biography and previous work
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I obtained my bachelor degree in Biological Science at Shanghai Ocean University, where I have plenty of training in Aquatic Biology. After that, I completed my master’s research at the East China Normal University. My research during this period focused on unraveling the molecular mechanisms underlying chromosome evolution in bats, with a particular emphasis on the role played by transposable elements (TEs) in driving genome evolution.
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I have always been fascinated by the power of evolution. Scientific research has also taught me the importance of creativity and collaboration. Connecting with people from diverse backgrounds and expertise is something I genuinely enjoy, as I believe the exchange of ideas ultimately leads to meaningful discoveries and growth. Outside of research, I love observing and filming nature, singing and cooking with friends, as well as exploring new interests like yoga, dancing and other activities to embrace new possibilities.
Publications
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Lan L.J.*, Zhang X.*, Yang S.X.*, Li L.J., Mao X.G. (2023). Chromosome-level genome assembly of the Stoliczka’s Asian trident bat (Aselliscus stoliczkanus). Scientific Data, 10, 902
Lan L.J.*, Zhang X.*, Yang S.X., Mao X.G., Dong J. (2024). Chromosome-level genome assembly of the king horseshoe bat (Rhinolophus rex) provides insights into its conservation status and chromosomal evolution of Rhinolophus. (Under review by Journal of Heredity)
Lan L.J.*, Zhang X.*, Xie J.J., Nie W.H., Wang J.H., Su W.T., Yang F. T., He G.M., Mao X.G. (2024). Comparative genomics provide insights into karyotype evolution in vespertilionid bats (Vespertilionidae, Chiroptera). (Under review by Molecular Ecology Resources)